Microbial communities in the fluid migration zone in the sediments of the Krasny Yar methane seep (South Baikal)

Abstract

The diversity and structure of microbial communities were investigated using 16S rRNA gene barcoding in the sediments of the Krasny Yar methane seep, in the zone of near-surface occurrence of gas hydrates and the presence of oxidized and restored channels. The diversity of both bacteria and archaea along the core depth was similar to the diversity found in sediments from other areas: methylotrophic methanogens and microorganisms involved in different stages of the organic matter fermentation were detected in the sediment strata of all depths investigated. Migration flows of oxygen-rich and aerobic bacteria-rich near-bottom water influenced greatly the diversity of microbial communities in oxidized channels. Fluids migrating from the deep zone to the bottom surface provided transport from anoxygenic sediments of anaerobic archaea involved in the AOM process. The data obtained are consistent with geochemical and geothermal indicators defining the zone of active migration of near-bottom waters.